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  • Introduction
  • Experimental Design
  • Workflow for Bluepippin Library
  • Data collection
  • Candidate break identification
  • Honey spots with simulated Alu deletion
  • Blast filter summary
  • SV event score-card
  • Alignment "gaps" found in single molecule reads
  • Gaps classified by RepeatMasker
  • Somatic gaps classified
  • "Unknown" event comes from one locus on chr2
  • Many gaps are repeat expansions or contractions
  • Somatic transposable element insertions across the genome
  • BreakDown junctions
  • Reconciling large somatic SV with LOHcate
  • SET:DPP10
  • PTPN14:FTSJD1: balanced translocation
  • BAGE:MLL3 fusion
  • Summary
  • Acknowledgments
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  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine
  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine
  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine
  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine
  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine
  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine
  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine
  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine
  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine
  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine
  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine
  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine
  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine
  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine
  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine
  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine
  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine
  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine
  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine
  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine
  • Speaker: David A. Wheeler, Ph.D / Baylor College of Medicine