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  • Introduction
  • Topics Today: Simplifying de novo assembly with PacBio tools available on DNAnexus: FALCON
  • Agenda
  • Global cloud-based platform providing secure, scalable and collaborative solutions for the genomics industry
  • Trusted Partner for PacBio Customers Globally
  • PacBio & DNAnexus Solution
  • Many PacBio de novo Assemblies Already Done with DNAnexus
  • PacBio Long-Reads in Genome Assembly
  • 877: Number of plant & animal genome assemblies listed in the NCBI database
  • Leaving Many Species Without a Reference Genome:
  • Traditional Genome Assembly Process
  • History of Read Length Performance
  • New Assembly Approaches
  • FALCON
  • FALCON (Cluster Environment)
  • What We Hear From Customers
  • FALCON on DNAnexus
  • Case Study: Tobacco
  • Plants Have Their Unique Challenges
  • Challenges of Tobacco Assembly
  • Input Data: High Volume & High Coverage
  • >19 million: Error corrected reads containing ~106 billion base pairs
  • 160,000: Core-Hours over 9 days
  • 42 TB: Data Produced
  • Storage is Easy
  • So is Collaboration
  • Tuning Assemblies is Easy on DNAnexus
  • Tweaking Assemblies is Easy on DNAnexus
  • Final Assembly
  • Tips for a Good Assembly
  • Quiver Polishing Step
  • FALCON as a Service
  • Upcoming Webinar: June 16
  • Contact Me
  • Q and A
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  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus
  • Speaker: Brett Hannigan, Director / Scientific Partnership at DNAnexus